Publications

Selected publications

1.
Molecular Regulation of Paused Pluripotency in Early Mammalian Embryos and Stem Cells
Vera A. van der Weijden and Aydan Bulut-Karslioglu
Front. Cell Dev. Biol., 27 July 2021
2.
Hypoxia induces a transcriptional early primitive streak signature in pluripotent cells enhancing spontaneous elongation and lineage representation in gastruloids
Natalia López-Anguita, Seher Ipek Gassaloglu, Maximilian Stötzel, Marina Typou, Iiris Virta, Sara Hetzel, René Buschow, Burak Koksal, Derya Atilla, Ronald Maitschke-Rajasekharan, Rui Chen, Alexandra L. Mattei, Ivan Bedzhov, David Meierhofer, Alexander Meissner, Jesse V. Veenvliet, Aydan Bulut-Karslioglu 
BioRxiv
3.
Chd1 regulates repair of promoter-proximal DNA breaks to sustain hypertranscription in embryonic stem cells
Aydan Bulut-Karslioglu, Hu Jin, Marcela Guzman-Ayala, Andrew JK Williamson, Miroslav Hejna, Anthony D Whetton, Jun S. Song, Miguel Ramalho-Santos
4.
The Transcriptionally Permissive Chromatin State of Embryonic Stem Cells Is Acutely Tuned to Translational Output
Aydan Bulut-Karslioglu, Trisha A. Macrae, Juan A. Oses-Prieto,Sergio Covarrubias,Michelle Percharde,Gregory Ku,Aaron Diaz, Michael T. McManus, Alma L. Burlingame, Miguel Ramalho-Santos.
Cell Stem Cell 2018, March 1;22(3):369-383
5.
Inhibition of mTOR induces a paused pluripotent state
Aydan Bulut-Karslioglu, Steffen Biechele, Hu Jin, Trisha A. Macrae, Miroslav Hejna, Marina Gertsenstein, Jun S. Song, Miguel Ramalho-Santos.
Nature 2016 Dec 1;540(7631):119-123
6.
Suv39h-Dependent H3K9me3 Marks Intact Retrotransposons and Silences LINE Elements in Mouse Embryonic Stem Cells
Aydan Bulut-Karslioglu, Inti A. De La Rosa-Velázquez, Fidel Ramirez, Maxim Barenboim, 
Megumi Onishi-Seebacher, Julia Arand, Carmen Galán, Georg E. Winter, Bettina Engist, Borbala Gerle, Roderick J. O’Sullivan, Joost H.A. Martens, Jörn Walter, Thomas Manke, Monika Lachner, Thomas Jenuwein.
Molecular Cell 2014 Jul 17;55(2):277-90
7.
A transcription factor–based mechanism for mouse heterochromatin formation
Aydan Bulut-Karslioglu, Valentina Perrera, Manuela Scaranaro, Inti Alberto de la Rosa-Velazquez, Suzanne van de Nobelen, Nicholas Shukeir, Johannes Popow, Borbala Gerle, Susanne Opravil, Michaela Pagani, Simone Meidhof, Thomas Brabletz, Thomas Manke, Monika Lachner, Thomas Jenuwein
Nature Structural and Molecular Biology 2012 Oct;19(10):1023-30
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