Publications

Selected publications

Molecular Regulation of Paused Pluripotency in Early Mammalian Embryos and Stem Cells

Vera A. van der Weijden and Aydan Bulut-Karslioglu
Front. Cell Dev. Biol., 27 July 2021

Hypoxia induces a transcriptional early primitive streak signature in pluripotent cells enhancing spontaneous elongation and lineage representation in gastruloids

Natalia López-Anguita, Seher Ipek Gassaloglu, Maximilian Stötzel, Marina Typou, Iiris Virta, Sara Hetzel, René Buschow, Burak Koksal, Derya Atilla, Ronald Maitschke-Rajasekharan, Rui Chen, Alexandra L. Mattei, Ivan Bedzhov, David Meierhofer, Alexander Meissner, Jesse V. Veenvliet, Aydan Bulut-Karslioglu 
BioRxiv

Chd1 regulates repair of promoter-proximal DNA breaks to sustain hypertranscription in embryonic stem cells

Aydan Bulut-Karslioglu, Hu Jin, Marcela Guzman-Ayala, Andrew JK Williamson, Miroslav Hejna, Anthony D Whetton, Jun S. Song, Miguel Ramalho-Santos

The Transcriptionally Permissive Chromatin State of Embryonic Stem Cells Is Acutely Tuned to Translational Output

Aydan Bulut-Karslioglu, Trisha A. Macrae, Juan A. Oses-Prieto,Sergio Covarrubias,Michelle Percharde,Gregory Ku,Aaron Diaz, Michael T. McManus, Alma L. Burlingame, Miguel Ramalho-Santos.

Cell Stem Cell 2018, March 1;22(3):369-383

Inhibition of mTOR induces a paused pluripotent state

Aydan Bulut-Karslioglu, Steffen Biechele, Hu Jin, Trisha A. Macrae, Miroslav Hejna, Marina Gertsenstein, Jun S. Song, Miguel Ramalho-Santos.

Nature 2016 Dec 1;540(7631):119-123

Suv39h-Dependent H3K9me3 Marks Intact Retrotransposons and Silences LINE Elements in Mouse Embryonic Stem Cells
Aydan Bulut-Karslioglu, Inti A. De La Rosa-Velázquez, Fidel Ramirez, Maxim Barenboim, 
Megumi Onishi-Seebacher, Julia Arand, Carmen Galán, Georg E. Winter, Bettina Engist, Borbala Gerle, Roderick J. O’Sullivan, Joost H.A. Martens, Jörn Walter, Thomas Manke, Monika Lachner, Thomas Jenuwein.

Molecular Cell 2014 Jul 17;55(2):277-90

A transcription factor–based mechanism for mouse heterochromatin formation

Aydan Bulut-Karslioglu, Valentina Perrera, Manuela Scaranaro, Inti Alberto de la Rosa-Velazquez, Suzanne van de Nobelen, Nicholas Shukeir, Johannes Popow, Borbala Gerle, Susanne Opravil, Michaela Pagani, Simone Meidhof, Thomas Brabletz, Thomas Manke, Monika Lachner, Thomas Jenuwein

Nature Structural and Molecular Biology 2012 Oct;19(10):1023-30

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