Publications in the Max Planck Publication Repository

Aznaourova, M.; Schmerer, N.; Janga, H.; Zhang , Z.; Pauck, K.; Bushe, J.; Volkers, S. M.; Wendisch, D.; Georg, P.; Ntini, E. et al.; Aillaud, M.; Gündisch, M.; Mack, E.; Skevaki , C.; Keller, C.; Bauer, C.; Bertrams, W.; Marsico, A.; Nist, A.; Stiewe, T.; Gruber, A. D.; Ruppert, C.; Li, Y.; Garn, H.; Sander, L. E.; Schmeck, B.; Schulte, L. N.: Single-cell RNA sequencing uncovers the nuclear decoy lincRNA PIRAT as a regulator of systemic monocyte immunity during COVID-19. Proceedings of the National Academy of Sciences of the United States of America 119 (36), e2120680119 (2022)

Herkt, C. E.; Caffrey, B.; Surmann, K.; Blankenburg, S.; Gesell Salazar, M.; Jung, A. L.; Herbel, S. M.; Hoffmann, K.; Schulte, L. N.; Chen, W. et al.; Sittka-Stark, A.; Völker, U.; Vingron, M.; Marsico, A.; Bertrams, W.; Schmeck, B.: A MicroRNA Network Controls Legionella pneumophila Replication in Human Macrophages via LGALS8 and MX1. mBio 11 (2), e03155-19 (2020)

Krakau, S.; Richard, H.; Marsico, A.: PureCLIP: Capturing target-specific protein-RNA interaction footprints from single-nucleotide CLIP-seq data. Genome Biology 18 (1), 1:240 (2017)

Heller, D.; Krestel, R.; Ohler, U.; Vingron, M.; Marsico, A.: ssHMM: extracting intuitive sequence-structure motifs from high-throughput RNA-binding protein data. Nucleic Acids Research (London) 45 (19), pp. 11004 - 11018 (2017)

Barros de Andrade e Sousa, L.; Marsico, A.: A statistical model for epigenetic control of miRNAs. PeerJ 4, 4:e2423v1 (2016)

Budach, S.; Heinig, M.; Marsico, A.: Principles of microRNA Regulation Revealed Through Modeling microRNA Expression. Genetics 203 (4), pp. 1629 - 1640 (2016)

Du Bois, I.; Marsico, A.; Bertrams, W.; Schweiger, M. R.; Caffrey, B.; Sittka-Stark, A.; Eberhardt, M.; Vera, J.; Vingron, M.; Schmeck, B. T.: Genome-wide Chromatin Profiling of Legionella pneumophila-Infected Human Macrophages Reveals Activation of the Probacterial Host Factor TNFAIP2. The Journal of Infectious Diseases 214 (3), pp. 454 - 463 (2016)

Musahl, A.; Huang, X.; Rusakiewicz, S.; Ntini, E.; Marsico, A.; Kroemer, G.; Kepp, O.; Ørom, U. A.: A long non-coding RNA links calreticulin-mediated immunogenic cell removal to RB1 transcription. Oncogene 34 (39), pp. 5046 - 5054 (2015)

Yang, X.; Marsico, A.: In silico promoter recognition from deepCAGE data. In: Enhancer RNAs: Methods and Protocols (Ed. Ørom, U. A.) (2017)

Caffrey, B.; Marsico, A.: Computational modeling of microRNA Biogenesis. In: Mathematical Models in Biology, pp. 85 - 98 (Eds. Zazzu, V.; Ferraro, M. B.). Springer International Publishing (2015)