Journal Article (90)

61.
Journal Article
Eischer, N.; Arnold, M.; Mayer, A.: Emerging roles of BET proteins in transcription and co-transcriptional RNA processing. Wiley interdisciplinary reviews: WIREs RNA 2022, e1734 (2022)
62.
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Cifuentes-Fontanals, L.; Tonello, E.; Siebert, H.: Control in Boolean Networks With Model Checking. Frontiers in Applied Mathematics and Statistics; Sec. Mathematical Biology 8, 838546 (2022)
63.
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Hansmeier, N. R.; Büschlen, I. S.; Behncke, R. Y.; Ulferts, S.; Bisoendial, R.; Hägerling, R.: 3D Visualization of Human Blood Vascular Networks Using Single-Domain Antibodies Directed against Endothelial Cell-Selective Adhesion Molecule (ESAM). International Journal of Molecular Sciences 23 (8), 4369 (2022)
64.
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Altenburg, T.; Giese, S. H.; Wang, S.; Muth, T.; Renard, B. Y.: Ad hoc learning of peptide fragmentation from mass spectra enables an interpretable detection of phosphorylated and cross-linked peptides. Nature Machine Intelligence 4, pp. 378 - 388 (2022)
65.
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Lehrach, H.; Curtis, J.; Lange, B.; Ogilvie, L. A.; Gauss, R.; Steininger, C.; Scholz, E.; Kreck, M.: Proposal of a population wide genome-based testing for Covid-19. Scientific Reports 12, 5618 (2022)
66.
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Kleinert, P.; Kircher, M.: A framework to score the effects of structural variants in health and disease. Genome Research 32 (4), pp. 766 - 777 (2022)
67.
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Meyer, F.; Fritz, A.; Deng, Z.-L.; Koslicki, D.; Lesker, T. R.; Gurevich, A.; Robertson, G.; Alser, M.; Antipov, D.; Beghini, F. et al.; Bertrand, D.; Brito, J. J.; Brown, C. T.; Buchmann, J.; Buluc, A.; Chen, B.; Chikhi, R.; Clausen, P. T. L. C.; Cristian, A.; Dabrowski, P. W.; Darling, A. E.; Egan, R.; Eskin, E.; Georganas, E.; Goltsman, E.; Gray, M. A.; Hansen, L. H.; Hofmeyr, S.; Huang, P.; Irber, L.; Jia, H.; Jorgensen, T. S.; Kieser, S. D.; Klemetsen, T.; Kola, A.; Kolmogorov, M.; Korobeynikov, A.; Kwan, J.; LaPierre, N.; Lemaitre, C.; Li, C.; Limasset, A.; Malcher-Miranda, F.; Mangul, S.; Marcelino, V. R.; Marchet, C.; Marijon, P.; Meleshko, D.; Mende, D. R.; Milanese, A.; Nagarajan, N.; Nissen, J.; Nurk, S.; Oliker, L.; Paoli, L.; Peterlongo, P.; Piro, V. C.; Porter, J. S.; Rasmussen, S.; Rees, E. R.; Reinert, K.; Renard, B.; Robertsen, E. M.; Rosen, G. L.; Ruscheweyh, H.-J.; Sarwal, V.; Segata, N.; Seiler, E.; Shi, L.; Sun, F.; Sunagawa, S.; Sorensen, S. J.; Thomas, A.; Tong, C.; Trajkovski, M.; Tremblay, J.; Uritskiy, G.; Vicedomini, R.; Wang, Z.; Wang, Z.; Wang, Z.; Warren, A.; Willassen, N.; Yelick, K.; You, R.; Zeller, G.; Zhao, Z.; Zhu, S.; Zhu, J.; Garrido-Oter, R.; Gastmeier, P.; Hacquard, S.; Haeussler, S.; Khaledi, A.; Maechler, F.; Mesny, F.; Radutoiu, S.; Schulze-Lefert, P.; Smit, N.; Strowig, T.; Bremges, A.; Sczyrba, A.; McHardy, A. C.: Critical Assessment of Metagenome Interpretation: the second round of challenges. Nature Methods 19 (4), pp. 429 - 440 (2022)
68.
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Vuaroqueaux, V.; Musch, A.; Kobelt, D.; Risch, T.; Herrmann, P.; Burock, S.; Peille, A.-L.; Yaspo, M.-L.; Fiebig, H.-H.; Stein, U.: Elevated MACC1 Expression in Colorectal Cancer Is Driven by Chromosomal Instability and Is Associated with Molecular Subtype and Worse Patient Survival. Cancers / Molecular Diversity Preservation International (MDPI) 14 (7), 1749 (2022)
69.
Journal Article
Bergfort, A.; Hilal, T.; Kuropka, B.; Ilik, I. A.; Weber, G.; Aktas, T.; Freund, C.; Wahl, M. C.: The intrinsically disordered TSSC4 protein acts as a helicase inhibitor, placeholder and multi-interaction coordinator during snRNP assembly and recycling. Nucleic Acids Research (London) 50 (5), pp. 2938 - 2958 (2022)
70.
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Aktas, T.: Transposons: catch them if you can. Nature Reviews Molecular Cell Biology 23, 306 (2022)
71.
Journal Article
Zywitza, V.; Rusha, E.; Shaposhnikov, D.; Ruiz-Orera, J.; Telugu, N.; Rishko, V.; Hayashi, M.; Michel, G.; Wittler, L.; Stejskal, J. et al.; Holtze, S.; Göritz, F.; Hermes, R.; Wang, J.; Izsvák, Z.; Colleoni, S.; Lazzari, G.; Galli, C.; Hildebrandt, T. B.; Hayashi, K.; Diecke, S.; Drukker, M.: Naïve-like pluripotency to pave the way for saving the northern white rhinoceros from extinction. Scientific Reports 12, 3100 (2022)
72.
Journal Article
Gralinska, E.; Kohl, C.; Fadakar, S.; Vingron, M.: Visualizing Cluster-specific Genes from Single-cell Transcriptomics Data Using Association Plots. Journal of Molecular Biology 434 (11), 167525 (2022)
73.
Journal Article
Bergfort, A.; Preußner, M.; Kuropka, B.; Ilik, I. A.; Hilal, T.; Weber, G.; Freund, C.; Aktas, T.; Heyd, F.; Wahl, M. C.: A multi-factor trafficking site on the spliceosome remodeling enzyme BRR2 recruits C9ORF78 to regulate alternative splicing. Nature Communications 13, 1132 (2022)
74.
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Hertzberg, J.; Mundlos, S.; Vingron, M.; Gallone, G.: TADA – a Machine Learning Tool for Functional Annotation based Prioritisation of Putative Pathogenic CNVs. Genome Biology 23, 67 (2022)
75.
Journal Article
Lybaek, H.; Robson, M.; de Leeuw, N.; Hehir-Kwa, J. Y.; Jeffries, A.; Haukanes, B. I.; Berland, S.; de Bruijn, D.; Mundlos, S.; Spielmann, M. et al.; Houge, G.: LRFN5 locus structure is associated with autism and influenced by the sex of the individual and locus conversions. Autism Research 15 (3), pp. 421 - 433 (2022)
76.
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Ropers, H.-H.; van Karnebeek, C. D.: Rare diseases: human genome research is coming home. Cold Spring Harbor Molecular Case Studies 8, a006210 (2022)
77.
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Smajić, S.; Prada-Medina, C. A.; Landoulsi, Z.; Ghelfi, J.; Delcambre, S.; Dietrich, C.; Henck, J.; Balachandran, S.; Pachchek, S.; Morris, C. M. et al.; Antony, P.; Timmermann, B.; Sauer, S.; Pereira, S. L.; Schwamborn, J. C.; May, P.; Grünewald, A.; Spielmann, M.: Single-cell sequencing of human midbrain reveals glial activation and a Parkinson-specific neuronal state. Brain 145 (3), pp. 964 - 978 (2022)
78.
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Beierlein, F.; Volkenandt, S.; Imhof, P.: Oxidation Enhances Binding of Extrahelical 5-Methyl-Cytosines by Thymine DNA Glycosylase. The Journal of Physical Chemistry B 126 (6), pp. 1188 - 1201 (2022)
79.
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Ly, L.-H.; Vingron, M.: Effect of imputation on gene network reconstruction from single-cell RNA-seq data. Patterns 3, 100414 (2022)
80.
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Meyer-Arndt, L.; Schwarz, T.; Loyal, L.; Henze, L.; Kruse, B.; Dingeldey, M.; Gürcan, K.; Uyar-Aydin, Z.; Müller, M. A.; Drosten, C. et al.; Paul, F.; Sander, L. E.; Demuth, I.; Lauster, R.; Giesecke-Thiel, C.; Braun, J.; Corman, V. M.; Thiel, A.: Cutting Edge: Serum but Not Mucosal Antibody Responses Are Associated with Pre-Existing SARS-CoV-2 Spike Cross-Reactive CD4+ T Cells following BNT162b2 Vaccination in the Elderly. The Journal of Immunology, 2100990 (2022)
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