Publications of M. Lappe

Stehr, H.; Jang, S. H.; Duarte, J. M.; Wierling, C.; Lehrach, H.; Lappe, M.; Lange, B. M.: The structural impact of cancer-associated missense mutations in oncogenes and tumor suppressors. Molecular Cancer 10, p. 54 (2011)

Timmermann, B.; Kerick, M.; Roehr, C.; Fischer, A.; Isau, M.; Boerno, S. T.; Wunderlich, A.; Barmeyer, C.; Seemann, P.; Koenig, J. et al.; Lappe, M.; Kuss, A. W.; Garshasbi, M.; Bertram, L.; Trappe, K.; Werber, M.; Herrmann, B. G.; Zatloukal, K.; Lehrach, H.; Schweiger, M. R.: Somatic mutation profiles of MSI and MSS colorectal cancer identified by whole exome next generation sequencing and bioinformatics analysis. PLoS ONE 5 (12), p. e15661 - e15661 (2010)

Sathyapriya, R.; Duarte, J. M.; Stehr, H.; Filippis, I.; Lappe, M.: Defining an essence of structure determining residue contacts in proteins. PLoS Computational Biology 5 (12), p. e1000584 - e1000584 (2009)

Lappe, M.; Bagler, G.; Filippis, I.; Stehr, H.; Duarte, J. M.; Sathyapriya, R.: Designing evolvable libraries using multi-body potentials. Current Opinion in Biotechnology 24 (4), pp. 437 - 446 (2009)

Daujat, S.; Weiss, T.; Mohn, F.; Lange, U. C.; Ziegler-Birling, C.; Zeissler, U.; Lappe, M.; Schübeler, D.; Torres-Padilla, M.-E.; Schneider, R.: H3K64 trimethylation marks heterochromatin and is dynamically remodeled during developmental reprogramming. Nature Structural & Molecular Biology 16 (7), pp. 777 - 781 (2009)

Milenković, T.; Filippis, I.; Lappe, M.; Pržulj, N.: Optimized null model for protein structure networks. PLoS ONE 4 (6), p. e5967 - e5967 (2009)

Bolser, D. M.; Filippis, I.; Stehr, H.; Duarte, J.; Lappe, M.: Residue contact-count potentials are as effective as residue-residue contact-type potentials for ranking protein decoys. BMC Structural Biology 8, p. 53 - 53 (2008)

Slama, P.; Filippis, I.; Lappe, M.: Detection of protein catalytic residues at high precision using local network properties. BMC Bioinformatics 9, p. 517 - 517 (2008)

Stumpf, M. P. H.; Thorne, T.; de Silva†, E.; Ronald, S.; An, H. J.; Lappe, M.; Wiuf, C.: Estimating the size of the human interactome. Proceedings of the Academy of Sciences of the United States of America 105 (19), pp. 6959 - 6964 (2008)

Paszkiewicz, K. H.; Sternberg, M. J. E.; Lappe, M.: Prediction of viable circular permutants using a graph theoretic approach. Bioinformatics 22 (1), pp. 1353 - 1358 (2006)

Park, D.; Lee, S.; Bolser, D.; Schroeder, M.; Lappe, M.; Oh, D.; Bhak, J.: Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map. Bioinformatics 21 (15), pp. 3234 - 3240 (2005)

Gong, S.; Yoon, G.; Jang, I.; Bolser, D.; Panos, D.; Schroeder, M.; Choi, H.; Cho, Y.; Han, K.; Lee, S. et al.; Choi, H.; Lappe, M.; Holm, L.; Kim, S.; Oh, D.; Bhak, J.: PSIbase: a database of Protein Structural Interactome map (PSIMAP). Bioinformatics 21 (10), pp. 2541 - 2543 (2005)

Lappe, M.; Holm, L.: Algorithms for protein interaction networks. Biochemical Society Transactions 33 (3), pp. 530 - 534 (2005)

Joining softassign and dynamic programming for the contact map overlap problem (Lecture Notes in Computer Science, 4414). First International Conference, BIRD 2007, Berlin, March 12, 2007 - March 14, 2007. Springer Berlin / Heidelberg, Berlin; Heidelberg (2007), 479 pp pp.