Our publications listed in the Puplication Repository of the Max Planck Society (PuRe)

Conference Paper (62)

3561.
Conference Paper
Pesic, M.; Narayanareddy, G. C.; Rettig, A.; Pfau, M.; Kovacsovics, A.; Eckert, C.; Yaspo, M. L.: The testicular niche – heterogeneity in leukemic cell adaptation to the new immunemicroenvironment. 35. Jahrestagung der Kind-Philipp-Stiftung für pädiatrisch onkologische Forschung, Wilsede, June 05, 2024 - June 08, 2024. Klinische Pädiatrie 236 (03), Article 211, (2024)
3562.
Conference Paper
Loske, J.; Völler, M.; Lukassen, S. ....; Lorenz, S.; Klages, S.; Eils, R. e. a.: Pharmakologische Aktivierung der CFTR-Funktion verbessert die Homöostase des Atemwegsepithels und die Immunabwehr bei Kindern mit Mukoviszidose. 45. Jahrestagung der Gesellschaft für Pädiatrische Pneumologie, Bochum, March 14, 2024 - March 16, 2024. Klinische Pädiatrie 236 (02), Article S23, (2024)
3563.
Conference Paper
Li, Z.; Peluffo, G.; Stevens, L.; Qiu, X.; Seehawer, M.; Huang, X.-Y.; Egri, S.; Papanastasiou, M.; Kingston, N.; D'Santos, C. et al.; Papachristou, E.; Nishida, J.; Evans, K.; Seo, J.-H.; Clement, K.; Temko, D.; Ekram, M.; Rees, M.; Ronan, M.; Roth, J.; Simeonov, A.; Kales, S.; Rai, G.; Lal-Nag, M.; Maloney, D.; Jadhav, A.; Michor, F.; Meissner, A.; Balko, J.; Carroll, J.; Freedman, M.; Long, H.; Jaffe, J.; Polyak, K.: KDM4C histone demethylase connects redox balance to chromatin remodeling via histone H3 tail clipping. AACR Special Conference on Cancer Research - Advances in Breast Cancer Research, San Diego, CA, October 19, 2023 - October 22, 2023. Cancer Research 84 (Suppl. 1), Article B008, (2024)
3564.
Conference Paper
Cifuentes Fontanals, L.; Tonello, E.; Siebert, H.: Computing trap space-based control strategies for Boolean networks using answer set programming. In: AIP Conference Proceedings 2611, Vol. 2611, 110002. International Conference of Computational Methods in Sciences and Engineering ICCMSE 2021, Heraklion, Greece, September 04, 2021 - September 07, 2021. AIP Publishing, College Park, Maryland (2022)
3565.
Conference Paper
Knaust, M.; Seiler, E.; Reinert, K.; Steinke, T.: Co-Design for Energy Efficient and Fast Genomic Search: Interleaved Bloom Filter on FPGA. In: FPGA '22, pp. 180 - 189. FPGA '22: Proceedings of the 2022 ACM/SIGDA International Symposium on Field-Programmable Gate Arrays, Virtual Event, February 27, 2022 - March 01, 2022. Association for Computing Machinery, New York, NY (2022)
3566.
Conference Paper
Klarner, H.; Tonello, E.; Cifuentes Fontanals, L.; Janody, F.; Chaouiya, C.; Siebert, H.: Detection of markers for discrete phenotypes. In: CSBio2021, pp. 64 - 68. CSBio2021: The 12th International Conference on Computational Systems-Biology and Bioinformatics, Virtual Event, October 14, 2021 - October 15, 2021. Association for Computing Machinery, New York, NY (2021)
3567.
Conference Paper
Meissner, A.; Hirsch, C.; Fritz, G.; Adjaye, J.; Schupp, N.: iPSC differentiating into renal proximal tubular cells are vulnerable to oxidative stress. 27th Annual Conference of the Society-for-Redox-Biology-and-Medicine (SfRBM) (Virtual meeting), November 18, 2020 - November 20, 2020. Free Radical Biology and Medicine 159, pp. S109 - S110 (2020)
3568.
Conference Paper
Klever, M.-K.; Sträng, E.; Jungnitsch, J.; Melo, U. S.; Hetzel, S.; Dolnik, A.; Schöpflin, R.; Schrezenmeier, J. F.; Blau, O.; Westermann, J. et al.; Döhner, K.; Schrezenmeier, H.; Spielmann, M.; Meissner, A.; Mundlos, S.; Bullinger, L.: Integration of Hi-C and Nanopore Sequencing for Structural Variant Analysis in AML with a Complex Karyotype: (Chromothripsis)². 62nd Annual Meeting and Exposition of the American Society of Hematology (ASH) (Virtual meeting), December 05, 2020 - December 08, 2020. Blood 136, Article 28, (2020)
3569.
Conference Paper
Knisbacher, B. A.; Lin, Z.; Hahn, C. K.; Nadeu, F.; Duran-Ferrer, M.; Stevenson, K. E.; Tausch, E.; Barbera-Mourelle, A.; Dunford, A.; Anand, S. et al.; Delgado, J.; Hess, J. M.; Taylor-Weiner, A.; Kretzmer, H.; Bousquets Muñoz, P.; Shaughnessy, C. J.; Fernandes, S. M.; Sivina, M.; Rassenti, L. Z.; Meissner, A.; Wiestner, A. ....; Getz, G.: The CLL-1100 Project: Towards Complete Genomic Characterization and Improved Prognostics for CLL. 62nd Annual Meeting and Exposition of the American-Society-of-Hematology (ASH) (Virtual meeting), December 05, 2020 - December 08, 2020. Blood 136, Article 3, (2020)
3570.
Conference Paper
Pan, H.; Renaud, L.; Chaligne, R.; Bloehdorn, J.; Tausch, E.; Mertens, D.; Fink, A.-M.; Fischer, K.; Zhang, C.; Betel , D. et al.; Gnirke, A.; Imielinski, M.; Moreaux , J.; Hallek, M.; Meissner, A.; Stilgenbauer, S.; Wu, C. J.; Elemento, O.; Landau, D. A.: Robust Discovery of Candidate DNA Methylation Cancer Drivers. 62nd Annual Meeting and Exposition of the American Society of Hematology (ASH) (Virtual meeting), December 05, 2020 - December 08, 2020. Blood 136, pp. 33 - 34 (2020)
3571.
Conference Paper
Cifuentes Fontanals, L.; Tonello, E.; Siebert, H.: Control Strategy Identification via Trap Spaces in Boolean Networks. In: CMSB 2020, part of Lecture Notes in Computer Science 12314, Vol. LNBI 12314, pp. 159 - 175 (Eds. Abate, A.; Petrov, T.; Wolf, V.). 18th International Conference, CMSB 2019: Computational Methods in Systems Biology, Konstanz, September 23, 2020 - September 25, 2020. Springer Nature Switzerland AG, Cham, Switzerland (2020)
3572.
Conference Paper
Rossmann, M.; Hoi, K.; Chan, V.; Abraham, B.; Yang, S.; Mullahoo, J.; Papanastasiou, M.; Elia, I.; Vyas, S.; Nag, P. et al.; Sullivan, L.; Perlin, J.; Hagedorn, E.; Hetzel, S.; Weigert, R.; Warren, C.; Dorjsuren, B.; Custo Greig, E.; Adatto, I.; Cowan, C.; Schreiber, S.; Young, R.; Meissner, A.; Haigis, M.; Carr, S.; Zon, L.: Transcriptional regulation of mitochondrial metabolism by TIF1γ drives erythroid progenitor differentiation. 49th Annual Scientific Meeting of the ISEH - International Society for Experimental Hematology (Virtual Meeting), New York City, USA, August 19, 2020 - August 21, 2020. Experimental Hematology 88, S35, (2020)
3573.
Conference Paper
Nowicka, M.; Siebert, H.: Designing Distributed Cell Classifier Circuits Using a Genetic Algorithm. In: CMSB 2019, part of Lecture Notes in Computer Science 11773, Vol. LNBI 11773, pp. 96 - 119 (Eds. Bortolussi, L.; Sanguinetti, G.). 17th International Conference, CMSB 2019: Computational Methods in Systems Biology, Trieste, Italy, September 18, 2019 - September 20, 2019. Springer Nature Switzerland AG, Cham, Switzerland (2019)
3574.
Conference Paper
Rohrandt, C.; Kraft, N.; Gießelmann, P.; Brändl, B.; Schuldt, B. M.; Jetzek, U.; Müller, F.-J.: Nanopore SimulatION – a raw data simulator for Nanopore Sequencing. In: 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), pp. 1536 - 1543. 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Madrid, Spain, December 03, 2018 - December 06, 2018. (2019)
3575.
Conference Paper
Schöpflin, R.; Andrey, G.; Heinrich, V.; Franke, M.; Ibrahim, D.; Paliou, C.; Mundlos, S.; Vingron, M.: Identification of potential regulatory elements in Capture-C interaction profiles. In: Genome Regulation in 3D. Genome Regulation in 3D, Rehovot, Israel, June 28, 2015 - June 30, 2015. Weizmann Institute, Rehovot, Israel (2015)
3576.
Conference Paper
Schöpflin, R.; Vingron, M.: Identification of cis-regulatory elements from chromosome conformation capture data. In: 19th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2015). 19th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2015), Warsaw, Poland, April 12, 2015 - April 15, 2015. (2015)
3577.
Conference Paper
Singer, T.; Snower, D. J.: Caring economics. In: Proceedings of the Annual Conference of the Institute for New Economic Thinking. Annual Conference. Institute for New Economic Thinking, Paris, April 08, 2015 - April 11, 2015. (2015)
3578.
Conference Paper
Jones, D. T. W.; Hovestadt, V.; Picelli, S.; Wang, W.; Northcott, P. A.; Kool, M.; Reifenberger, G.; Pietsch, T.; Sultan, M.; Lehrach, H. et al.; Yaspo-Lehrach, M. L.; Borkhardt, A.; Landgraf, P.; Eils, R.; Korshunov, A.; Zapatka, M.; Radlwimmer, B.; Pfister, S. M.; Lichter, P.: The Medulloblastoma Methylome Reveals New Epigenetic Regulatory Mechanisms. In: Neuro-Oncology, Vol. 15, p. 144 - 144. 4th Quadrennial Meeting of the World Federation of Neuro-Oncology held in conjunction with the 18th Annual SNO Scientific Meeting and Eucation Day, San Francisco, November 21, 2013 - November 24, 2013. (2013)
3579.
Conference Paper
Sudbrak, R.; Lehrach, H.: IT Future of Medicine (ITFoM). In: Proceedings Iwbbio 2013: International Work-Conference on Bioinformatics and Biomedical Engineering, p. 335 - 335. International Work-Conference on Bioinformatics and Biomedical Engineering, IWBBIO 2013, Granada, Spain, March 18-20, 2013. Proceedings. , Grenada, March 18, 2013 - March 20, 2013. (2013)
3580.
Conference Paper
Gorgolewski, K. J.; Bazin, P.-L.; Engen, H. G.; Margulies, D. S.: Fifty Shades of Gray, Matter: Using Bayesian priors to improve the power of whole-brain voxel- and connexelwise inferences. In: 2013 International Workshop on Pattern Recognition in NeuroImaging (PRNI). (2013)
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