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Journal Article (9)

Journal Article
Charlton, J.; Jung, E. J.; Mattei, A. L.; Bailly, N.; Liao, J.; Martin, E. J.; Gießelmann, P.; Brändl, B.; Stamenova, E. K.; Müller, F.-J. et al.; Kiskinis, E.; Gnirke, A.; Smith, Z. D.; Meissner, A.: TETs compete with DNMT3 activity in pluripotent cells at thousands of methylated somatic enhancers. Nature Genetics 52 (8), pp. 819 - 827 (2020)
Journal Article
Gießelmann, P.; Brändl, B.; Raimondeau, E.; Bowen, R.; Rohrandt, C.; Tandon, R.; Kretzmer, H.; Assum, G.; Galonska, C.; Siebert, R. et al.; Ammerpohl, O.; Heron, A.; Schneider, S. A.; Ladewig, J.; Koch, P.; Schuldt, B. M.; Graham, J. E.; Meissner, A.; Müller, F.-J.: Analysis of short tandem repeat expansions and their methylation state with nanopore sequencing. bioRxiv (Preprint Server), 480285 (2019)
Journal Article
Giesselmann, P.; Hetzel, S.; Müller, F.-J.; Meissner, A.; Kretzmer, H.: Nanopype: A modular and scalable nanopore data processing pipeline. Bioinformatics 2019, btz461 (2019)
Journal Article
Krols, M.; Asselbergh, B.; De Rycke, R.; De Winter, V.; Seyer, A.; Müller, F.-J.; Kurth, I.; Bultynck, G.; Timmerman, V.; Janssens, S.: Sensory neuropathy-causing mutations in ATL3 affect ER-mitochondria contact sites and impair axonal mitochondrial distribution. Human Molecular Genetics 28 (4), pp. 615 - 627 (2019)
Journal Article
Neureiter, A.; Brändl, B.; Hiber, M.; Tandon, R.; Müller, F.-J.; Steenpass, L.: Generation of an iPSC line of a patient with Angelman syndrome due to an imprinting defect. Stem Cell Research 33, pp. 20 - 24 (2018)
Journal Article
Tandon, R.; Brändl, B.; Baryshnikova, N.; Landshammer, A.; Steenpaß, L.; Keminer, O.; Pless, O.; Müller, F.-J.: Generation of two human isogenic iPSC lines from fetal dermal fibroblasts. Stem Cell Research 33, pp. 120 - 124 (2018)
Journal Article
Allison, T. F.; Andrews, P. W.; Avior, Y.; Barbaric, I.; Benvenisty, N.; Bock, C.; Brehm, J.; Bruestle, O.; Damjanov, I.; Elefanty, A. et al.; Felkner, D.; Gokhale, P. J.; Halbritter, F.; Healy, L. E.; Hu, T. X.; Knowles, B. B.; Loring, J. F.; Ludwig, T. E.; Mayberry, R.; Micallef, S.; Mohamed, J. S.; Müller, F.-J.; Mummery, C. L.; Nakatsuji, N.; Ng, E. S.; Oh, S. K. W.; O'Shea, O.; Pera, M. F.; Reubinoff, B.; Robson, P.; Rossant, J.; Schuldt, B. M.; Solter, D.; Sourris, K.; Stacey, G.; Stanley, E. G.; Suemori, H.; Takahashi, K.; Yamanaka, S.: Assessment of Established Techniques to Determine Developmental and Malignant Potential of Human Pluripotent Stem Cells. Nature Communications 9 (1), 1925 (2018)
Journal Article
Vögtle, F.-N.; Brändl, B.; Larson, A.; Pendziwiat, M.; Friederich, M. W.; White, S. M.; Basinger, A.; Kücükköse, C.; Muhle, H.; Jähn, J. A. et al.; Keminer, O.; Helbig, K. L.; Delto, C. F.; Myketin, L.; Mossmann, D.; Burger, N.; Miyake, N.; Burnett, A.; van Baalen, A.; Lovell, M. A.; Matsumoto, N.; Walsh, M.; Yu, H.-C.; Deepali N. Shinde, D. N.; Stephani, U.; Van Hove, J. L. K.; Müller, F.-J.; Helbig, I.: Mutations in PMPCB Encoding the Catalytic Subunit of the Mitochondrial Presequence Protease Cause Neurodegeneration in Early Childhood. American Journal of Human Genetics 102 (4), pp. 557 - 573 (2018)
Journal Article
Stumpf, P. S.; Smith, R. C. G.; Lenz, M.; Schuppert, A.; Müller, F.-J.; Babtie, A.; Chan, T. E.; Stumpf, M. P. H.; Please, C. P.; Howison, S. D. et al.; Arai, F.; MacArthur, B. D.: Stem Cell Differentiation as a Non-Markov Stochastic Process. Cell Systems 5 (3), e7, pp. 268 - 282 (2017)

Conference Paper (1)

Conference Paper
Rohrandt, C.; Kraft, N.; Gießelmann, P.; Brändl, B.; Schuldt, B. M.; Jetzek, U.; Müller, F.-J.: Nanopore SimulatION – a raw data simulator for Nanopore Sequencing. In: 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 18399242 . 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), Madrid, Spain, December 03, 2018 - December 06, 2018. (2019)
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