Publications of Martin Vingron
All genres
Journal Article (203)
201.
Journal Article
19 (1), pp. 8 - 13 (2002)
Estimating Amino Acid Substitution Models: A Comparison of Dayhoff's Estimator, the Resolvent Approach and a Maximum Likelihood Method. Molecular Biology and Evolution 202.
Journal Article
The SYSTERS Protein Family Database in 2005.
203.
Journal Article
A gene expression map of Arabidopsis development.
Book Chapter (11)
204.
Book Chapter
Exact Score Distribution Computation for Similarity Searches in Ontologies. In: Algorithms in Bioinformatics, pp. 298 - 309 (Eds. Salzberg, S. L.; Warnow, T.). Springer, New York [et al] (2009)
205.
Book Chapter
Fast and adaptive variable order Markov chain construction. In: Algorithms in Bioinformatics, pp. 306 - 317 (Eds. Crandall, K. A.; Lagergren, J.). Springer, Berlin / Heidelberg (2008)
206.
Book Chapter
From gene expression profiling to gene regulation. In: Modern Genome Annotation, pp. 91 - 102 (Eds. Frishman, D.; Valencia, A.). Springer, Wien (2008)
207.
Book Chapter
A biophysical approach to large-scale protein-DNA binding data. In: Modern Genome Annotation: The Biosapiens Network, pp. 91 - 102 (Eds. Frishman, D.; Valencia, A.). Springer, New York (2008)
208.
Book Chapter
Integer linear programming approaches for non-unique probe selection. In: Discrete Mathematics and Data Mining II - DM & DM II, pp. 840 - 856 (Eds. Anthony, M.H.G.; Boros, E.; Hammer, P.L.; Kogan, A.). Elsevier, Amsterdam et al (2007)
209.
Book Chapter
Reconstructing Domain Compositions of Ancestral Multi-Domain Proteins. In: Comparative Genomics, pp. 1 - 10. Springer, Berlin/Heidelberg (2006)
210.
Book Chapter
An Improved Algorithm for the Macro-evolutionary Phylogeny Problem. In: Combinatorial Pattern Matching, pp. 177 - 187. Springer, Berlin/Heidelberg (2006)
211.
Book Chapter
Nuber, U.). Garland Science, Great Britain (2005)
Normalization strategies for microarray data analysis. In: DNA Microarrays, pp. 215 - 223 (Ed. 212.
Book Chapter
Analysis of microarray gene expression data. In: Handbook of Statistical Genetics, p. / - / (Eds. Balding, D. J.; Bishop, M.; Cannings, C.). John Wiley & Sons, Ltd, Chichester [et al] (2003)
213.
Book Chapter
Correspondence analysis with microarray data. In: Perspectives in gene expression, pp. 307 - 343 (Ed. Appasani, K.). Eaton Publishing, Westborough, MA (2003)
214.
Book Chapter
Microarray Data Representation, Annotation and Storage. In: Chip Technology, pp. 113 - 139 (Ed. Hoheisel, J.). Springer-Verlag, Heidelberg (2002)
Proceedings (1)
215.
Proceedings
Gaussian mixture density estimation applied to microarray data (Lecture Notes in Computer Sciences, 2810). 5th International Symposium on Intelligent Data Analysis, IDA 2003, Berlin, Germany, August 28, 2003 - August 30, 2003. Springer, Berlin [et al] (2003), 624 pp pp.
Conference Paper (15)
216.
Conference Paper
2015. Genome Regulation in 3D, Rehovot, Israel, June 28, 2015 - June 30, 2015. Weizmann Institute, Rehovot, Israel (2015)
Identification of potential regulatory elements in Capture-C interaction profiles. In: Genome Regulation in 3D, Vol. 217.
Conference Paper
Identification of cis-regulatory elements from chromosome conformation capture data. In: 19th Annual International Conference on Research in Computational Molecular Biology (RECOMB 2015). 19th Annual International Conference on Research in Computational
Molecular Biology (RECOMB 2015), Warsaw, Poland, April 12, 2015 - April 15, 2015. (2015)
218.
Conference Paper
Statistics for Co-Occurrence of DNA Motifs. 2008 International Workshop on Applied Probability, Université de Technologie de Compiègne, France, July 07, 2008 - July 10, 2008. (2008)
219.
Conference Paper
Statistical detection of co-operative transcription factors with similarity adjustment. In: Proceedings of the German Conference on Bioinformatics, GCB, pp. 96 - 105 (Ed. Andreas Beyer, M. S.). German Conference on Bioinformatics (GCB), Dresden, September 09, 2008 - September 12, 2008. GI (2008)
220.
Conference Paper
18, pp. 109 - 118 (2007)
Using Transcription Factor Binding Site Co-Occurrence to Predict Regulatory Regions. The Seventh Annual International Workshop on Bioinformatics and Systems Biology, Institute of Medical Science, The University of Tokyo, Japan, July 31, 2007 - August 02, 2007. Genome Informatics