Publikationen von Ralf Herwig

van Delft, J.; Gaj, S.; Lienhard, M.; Albrecht, M.; Kirpiy, A.; Brauers, K.; Claessen, S.; Lizarraga, D.; Lehrach, H.; Herwig, R. et al.; Kleinjans, J.: RNA-Seq provides new insights in the transcriptome responses induced by the carcinogen benzo[a]pyrene. Toxicological Sciences 130 (2), S. 427 - 439 (2012)

Abecasis, G. R.; Auton, A.; Brooks, L. D.; DePristo, M. A.; Durbin, R. M.; Handsaker, R. E.; Kang, H. M.; Marth, G. T.; McVean, G. A.; The 1000 Genomes Project Consortium et al.; Sudbrak, R.; Albrecht, M.; Amstislavskiy, V.; Borodina, T. A.; Davydov, A.; Herwig, R.; Lienhard, M.; Mertes, F.; Sultan, M.; Timmermann, B.; Yaspo, M. L.; Lehrach, H.: An integrated map of genetic variation from 1,092 human genomes. Nature 491 (7422), S. 56 - 65 (2012)

Kamburov, A.; Grossmann, A.; Herwig, R.; Stelzl, U.: Cluster-based assessment of protein-protein interaction confidence. BMC Bioinformatics, S. 13:262 - 13:262 (2012)

Wierling, C.; Kühn, A.; Hache, H.; Daskalaki, A.; Maschke-Dutz, E.; Peycheva, S.; Li, J.; Herwig, R.; Lehrach, H.: Prediction in the face of uncertainty: a Monte Carlo-based approach for systems biology of cancer treatment. Mutation Research-Genetic Toxixology and Environmental Mutagenesis 746 (2), S. 163 - 170 (2012)

Kamburov, A.; Stelzl, U.; Herwig, R.: IntScore: a web tool for confidence scoring of biological interactions. Nucleic Acids Research (London) 40 (Web Server issue), S. W140 - W146 (2012)

Dreher, F.; Kreitler, T.; Hardt, C.; Kamburov, A.; Yildirimman, R.; Schellander, K.; Lehrach, H.; Lange, B. M. H.; Herwig, R.: DIPSBC--data integration platform for systems biology collaborations. BMC Bioinformatics 13, 13:85 (2012)

The 1000 Genomes Project Consortium; Sudbrak, R.; Albrecht, M.; Amstislavskiy, V.; Borodina, T. A.; Dahl, A.; Davydov, A.; Herwig, R.; Marquardt, P.; Mertes, F. et al.; Nietfeld, W.; Parkhomchuk, D.; Soldatov, A.; Timmermann, B.; Tolzmann, M.; Lehrach, H.: The 1000 Genomes Project: data management and community access. Nature methods 9 (5), S. 459 - 462 (2012)

MacArthur, D. G.; Balasubramanian, S.; Frankish, A.; 1000 Genomes Project, C.; Sudbrak, R.; Albrecht , M. W.; Amstislavskiy, V.; Borodina, T. A.; Dahl, A.; Davydov, A. et al.; Herwig, R.; Marquardt, P.; Mertes, F.; Nietfeld, W.; Parkhomchuk, D.; Soldatov, A.; Timmermann, B.; Tolzmann, M.; Lehrach, H.: A Systematic Survey of Loss-of-Function Variants in Human Protein-Coding Genes. Science 335 (6070), S. 823 - 828 (2012)

Dreher, F.; Kamburov, A.; Herwig, R.: Construction of a pig physical interactome using sequence homology and a comprehensive reference human interactome. Evolutionary Bioinformatics 8, S. 119 - 126 (2012)

Meinel, T.; Schweiger, M. R.; Ludewig, A. H.; Chenna, R.; Krobitsch, S.; Herwig, R.: Ortho2ExpressMatrix--a web server that interprets cross-species gene expression data by gene family information. BMC Genomics 12, 12:483 (2011)

Donnarumma, F.; Schober, M.; Greilberger, J.; Matzi, V.; Lindenmann, J.; Maier, A.; Herwig, R.; Wintersteiger, R.: Method development and validation for the analysis of a new anti-cancer infusion solution via HPLC. Journal of Separation Science 34 (2), S. 135 - 41 (2011)

Chavez, L.; Bais, A. S.; Vingron, M.; Lehrach, H.; Adjaye, J.; Herwig, R.: In silico identification of a core regulatory network of OCT4 in human embryonic stem cells using an integrated approach. BMC Genomics 10, S. 314 - 314 (2009)

Hache, H.; Lehrach, H.; Herwig, R.: Reverse Engineering of Gene Regulatory Networks: A Comparative Study. EURASIP Journal on Bioinformatics and Systems Biology 2009, ID 617281 (2009)

Hache, H.; Wierling, C.; Lehrach, H.; Herwig, R.: GeNGe: systematic generation of gene regulatory networks. Bioinformatics. Bioinformatics 25 (9), S. 1205 - 1207 (2009)

Kamburov, A.; Wierling, C.; Lehrach, H.; Herwig, R.: ConsensusPathDB—a database for integrating human functional interaction networks. Nucleic Acids Research 37 (Database issue), S. D623 - D628 (2008)

Rasche, A.; Al-Hasani, H.; Herwig, R.: Meta-analysis approach identifies candidate genes and associated molecular networks for Type-2 Diabetes Mellitus. BMC Genomics 9, S. 9:310 - 9:310 (2008)

Adjaye, J.; Herwig, R.; Brink, T. C.; Herrmann, D.; Greber, B.; Sudheer, S.; Groth, D.; Carnwath, J. W.; Lehrach, H.; Niermann, H.: Conserved molecular portraits of bovine and human blastocysts as a consequence of the transition from maternal to embryonic control of gene expression. Physiological Genomics 31 (2), S. 315 - 327 (2007)

Wierling, C.; Herwig, R.; Lehrach, H.: Resources, standards and tools for systems biology. Briefings in Functional Genomics and Proteomics 6 (3), S. 240 - 251 (2007)

Poustka, A. J.; Kühn, A.; Groth, D.; Weise, V.; Yaguchi, S.; Burke, R. D.; Herwig, R.; Lehrach, H.; Panopoulou, G.: A global view of gene expression in lithium and zinc treated sea urchin embryos: new components of gene regulatory networks. Genome Biology 8 (5), S. R85 - R85 (2007)

Sultan, M.; Piccini, I.; Balzereit, D.; Herwig, R.; Saran, N. G.; Lehrach, H.; Reeves, R. H.; Yaspo, M.-L.: Gene expression variation in Down's syndrome mice allows prioritization of candidate genes. Genome Biology 8 (5), S. R91 - R91 (2007)