David Heller

David Heller

Doktorand/in
Abt. Bioinformatik
IMPRS-BAC
Vingron Lab
(030) 8413 1169
3.3.07

Main Focus

  • Long-read sequencing technology (PacBio, Nanopore)
  • Structural variant detection
  • Genome assembly
  • Genome alignment
  • Haplotype assembly

Curriculum Vitae

2013: BSc in IT-Systems Engineering, Hasso Plattner Institute at the University of Potsdam

2016: MSc in IT-Systems Engineering, Hasso Plattner Institute at the University of Potsdam

Since 2016: IMPRS-CBSC student under the supervision of Prof. Dr. Martin Vingron

Publications

  • D Heller, M Vingron (2019)
    SVIM: Structural Variant Identification using Mapped Long Reads.
    Bioinformatics, [epub ahead of print]
  • D Heller, R Krestel, U Ohler, M Vingron, A Marsico (2017)
    ssHMM: Extracting intuititve sequence-structure motifs from high-throughput RNA-binding protein data.
    Nucleic Acids Res., 45 (19): 11004-11018
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