. Publications Christine Steinhoff
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Scientific Publications

  • Manuscript:Knockdown of RNA Binding Protein Musashi1 Induces Cell Apoptosis and Decreases Cell Proliferation in Human Bladder Cancer Cell Lines
    Nikpour P., Baygi M.E., Steinhoff C., Hader C., Luca A.C., Mowla S.J., Schulz W.A.

  • Manuscript: Copy Number Estimation with Array CGH
    Hauth J., Steinhoff C., Georgi B., Schliep A., Lang P.

  • under review: The Genome Wide Dynamics of the Binding of the Ldb1 Complex during Erythroid Differentiation.
    Soler E., Andrieu-Soler C., de Boer E., Bryne J.C., Thongjuea S., Stadhouders R., Palstra R.J., Kock C., van IJcken W., Hou J., Steinhoff C., Rijkers E., Lenhard B., Grosveld F.

  • under review: MethVisual – R package for visualization and exploratory statistical analysis of DNA methylation profiles
    Zackay A., Steinhoff C.

  • Manuscript: Joint Visualization of arrayCGH, gene expression and Medical covariate data
    Steinhoff C., Pardo M., Vingron M.

  • Statistical Exploration of Genomewide DNA Methylation Profiling
    in: Statistik, 2009, Biometrische Aspekte der Genomanalyse IV, Schwerpunkt: Epigenetik,
    Ronja Foraita, Andreas Ziegler, Claudia Hemmelmann (Ed.)
    Ahmed R., Vingron, M., Steinhoff, C.
    Shaker Verlag, ISBN: 978-3-8322-8358-2

  • Expression profile and TFBS exploration of imprinted genes in human and mouse
    Steinhoff, C., Paulsen, M., Kielbasa, S., Walter, J., Vingron, M.
    BMC Genomics, 2009, 10:144

  • Bookchapter: Methylation of Endogenous Human Retroelements in Health and Disease
    Schulz W.A., Steinhoff C., Florl A.R.
    Current Topics in Microbiology and Immunology (CTMI) 310 "DNA Methylation: Development, Genetic Disease and Cancer" Springer, 211-250

  • Review: Normalization and Quantification of Differential Expression
    Steinhoff C. and Vingron M.
    Briefings in Bioinformatic, Advance Access published on March 7, 2006

  • Up-regulation of glucocorticoid-regulated genes in a mouse model of Rett syndrome
    Nuber UA, Kriaucionis S, Roloff TC, Guy J, Selfridge J, Steinhoff C, Schulz R, Lipkowitz B, Ropers HH, Holmes MC, Bird A.
    Hum Mol Genet. 2005 Aug 1;14(15):2247-56. Epub 2005 Jul 7.

  • Bookchapter: Normalization strategies for microarray data analysis
    Steinhoff C. & Vingron M.
    in: DNA Microarrays, Garland Science Publishing Taylor & Francis Group
    DNA Microarrays, BIOS Methods Series

  • Long-term maintenance of hematopoietic stem cells does not require contact with embryo-derived stromal cells in cocultures.
    Oostendorp RA, Robin C, Steinhoff C, Marz S, Brauer R, Nuber UA, Dzierzak EA, Peschel C.
    Stem Cells. 2005 Jun;23(6):842-51.

  • Analyzing Gene Expression Time-Courses IEEE/ACM Transactions on Computational Biology and Bioinformatics
    A. Schliep, I. G. Costa, C. Steinhoff, A. A. Schoenhuth. (2005)
    (Special Issue on Machine Learning for Bioinformatics), 2005, 2(3):179-193

  • Robust inference of groups in gene expression time-courses using mixtures of HMMs
    Schliep A, Steinhoff C, Schönhuth A
    Bioinformatics. 2004 Aug 4;20 Suppl 1:I283-I289

  • Gene expression changes in the course of neural progenitor cell differentiation
    Gurok U, Steinhoff C, Lipkowitz B, Ropers HH, Scharff C, Nuber U
    J Neurosci. 2004 Jun 30;24(26):5982-6002

  • Coordinate hypermethylation at specific genes in prostatic carcinoma
    Linnemann-Florl AR, Steinhoff C, Seifert HH, Hader C, Engers R, Ackermann R, Schulz WA
    Br J Cancer. 2004 Aug 31;91(5):985-94

  • Decreased Fas Expression in advanced stage bladder cancer is not related to p53 status
    Maas S, Warskulat U, Steinhoff C, Müller W, Grimm MO, Schulz WA, Seifert HH
    Urology. 2004 Feb;63(2):392-7.

  • Different molecular mechanisms underlie placental overgrowth phenotypes caused by interspecies hybridization, cloning, and Esx1 mutation.
    Singh U, Fohn LE, Wakayama T, Ohgane J, Steinhoff C, Lipkowitz B, Schulz R, Orth A, Ropers HH, Behringer RR, Tanaka S, Shiota K, Yanagimachi R, Nuber UA, Fundele R.
    Dev Dyn. 2004 May;230(1):149-64

  • Gaussian Mixture Density Estimation applied to Microarray Data
    Steinhoff C, Müller T, Nuber UA, Vingron M
    LNCS (Lecture Notes in Computer Sciences) 2810, 2003, 418-429

  • Using Hidden Markov Models to Analyze Gene Expression Time Course Data
    Schliep A, Schönhuth A, Steinhoff C
    Bioinformatics. 2003 Jul;19 Suppl 1:I255-I263

  • Transcriptional Regulation of the human LINE-1 Retrotransposon L1.2B and its biological activity
    Steinhoff C, Schulz WA
    Mol Genet Genomics (MGG) 2003 Oct 7 [Epub ahead of print]

  • Genomewide distribution of putative functional human LINE-1 retrotransposons
    Steinhoff C, Schulz WA
    Tech Report; http://edoc.mpg.de; ID: 20927.0

  • Effect of routine repeated transurethral resection (ReTURB) of superficial bladder cancer
    Grimm MO, Steinhoff C, Simon X, Spiegelhalder P, Ackermann R, Vögeli TA
    J Urol. 2003 Aug;170(2 Pt 1):433-7

  • Gene expression profile of mouse bone marrow stromal cells determined by cDNA microarray analysis
    Wieczorek G, Steinhoff C, Schulz R, Scheller M, Vingron M, Ropers HH, Nuber UA
    Cell Tissue Res. 2003 Feb;311(2):227-37.
    Supplemental Information

  • Decrease of DNA methyltransferase I expression relative to cell proliferation in transitional cell carcinoma
    Kimura F, Seifert HH, Florl AR, Santourlidis S, Steinhoff C, Swiatkowski S, Mahotka C, Gerharz CD, Schulz WA
    Int J Cancer. 2003 May 1;104(5):568-78.

  • Activities of MAP-Kinase pathways in normal uroepithelial cells and urothelial carcinoma cell lines
    Swiatkowski S, Seifert HH, Steinhoff C, Prior A, Thievessen I, Schliess F, Schulz WA
    Exp Cell Res. 2003 Jan 1;282(1):48-57

  • Activity of E2F-dependent promoters in bladder carcinoma cells and their use for tumor-specific targeting of p53-induced apoptosis
    Steinhoff C, Prior A, Reichmann G, Seifert HH, Schulz WA
    Int J Oncol 2002 Nov;21(5):1033-400

  • Polymorphic methyl group metabolism genes in patients with transitional cell carcinoma of the urinary bladder.
    Kimura F, Florl AR, Steinhoff C, Golka K, Willers R, Seifert HH, Schulz WA.
    Mutat Res. 2001 Jun, 458(1-2):49-54

  • Up-regulation of cyclin-dependent kinase 4/cyclin D2 expression but down-regulation of cyclin-dependent kinase 2/cyclin E in testicular germ cell tumors.
    Schmidt BA, Rose A, Steinhoff C, Strohmeyer T, Hartmann M, Ackermann R.
    Cancer Res. 2001 May 15,61(10):4214-21

  • Glutathione transferase isozyme genotypes in patients with prostate and bladder carcinoma.
    Steinhoff C, Franke KH, Golka K, Thier R, Romer HC, Rotzel C, Ackermann R, Schulz WA.
    Arch Toxicol 2000 Nov, 74(9):521-6

  • Methyl group metabolism gene polymorphisms and susceptibility to prostatic carcinoma.
    Kimura F, Franke KH, Steinhoff C, Golka K, Roemer HC, Anastasiadis AG, Schulz WA.
    Prostate 2000 Nov 1, 45(3):225-31

  • Cyclin-dependent kinase inhibitor P27(KIP1) is expressed preferentially in early stages of urothelial carcinoma.
    Franke KH, Miklosi M, Goebell P, Clasen S, Steinhoff C, Anastasiadis AG, Gerharz C, Schulz WA.
    Urology 2000 Oct 1, 56(4):689-95

  • Classification of orbit closure of 4-dimensional complex Lie algebras
    Burde D; Steinhoff C.
    Journal of Algebra 1999, 214(2), 729-739

    steinhof(AT)molgen.mpg.de; Last Change: 30.06.06