Primers used in :

Panel of microsatellite markers for whole-genome scans and radiation hybrid mapping and a mouse family tree

Leonard C. Schalkwyk, Martin Jung, Angelika Daser, Michael Weiher, Jörn Walter, Heinz Himmelbauer, Hans Lehrach

Genome Research 9(9):878-887, 1999.

abstract
full text (for Genome Research subscribers)

Max-Planck-Institut für molekulare Genetik and Mikrosatellitenzentrum of the Max-Delbrück Center

asterisks indicate primer sequences different from Dietrich et al

Polymorphism data
D1Mit136 TAGCCCTACACACTGTAGAAATGC TGAACACAAAGTAGTAAATGCGTG
D1Mit206 TGAGGCACCTTTGTATTCAGC CCAGATGTCTTTGAACATTCTCC
D1Mit211 GTTATTCATCAAAATACAGATGGCC TCTGCTGCTAAGTAGAATGAATGC
D1Mit216 GGGAGACAACAAATAATCATATTGC AGAGGTGGGTCCTGGAAACT
D1Mit234 TCCATTATTCCCAGAACCCA TCAATGTTATTTTTTGCATC*
D1Mit303 GGTTTCTATTTCGGTTCTCGG TCTGTGCTGCAAAACAGAGG
D1Mit332 CATCTGAAGAAAATGAAGAACGG GCCAGCACAGAAAAAGAATAGC
D1Mit424 TCTACTCCTGCAGTTTATTAATG* ATAAAGTGCTACAGGCAATCTGG
D1Mit446 TGAGTATATCATGAAGACAGCAACC ACGTATTTACCTTGTTCTGAAT*
D2Mit117 CCCAAAGAACATACATCAATG* TGGAGATGCATGTTTAAAACTCA
D2Mit148 GTTCTCTGATCTACGGGCATG TTCACTTCTACAAGTTCTACAAG*
D2Mit206 TGTCAGAACTGGACAATGTCG ATGATAACAGACACTAATGATTAG*
D2Mit365 GAGATCCCACTGATGATACAAGC AGATGTGCCCAAGGGTCC
D2Mit372 GAAGACTGAGTCACAACTTC* CGGAAGTGGAGAAAGTTACC*
D2Mit380 CCTCAGGTCTGAAATGAGGTG AATGATGTGCATGTGCGC
D2Mit417 GTTCTTATTTTACTGGGGTCATGG TGGGTCACCTTAACAAGAATAATT
D2Mit493 GTCTCTACCTGAGTTTCCATC* TCCCGAGTTGTCCCTCTATG
D2Mit525 CACCTGACATCGACCTCTGA AGACCTGTGTGTCCATACACATG
D3Mit130 AACACATGAAACGTGTGCG* TGATAGGCATGCTTAAGC*
D3Mit258 ACACAGGAATATGGTGTGAGTCC AACAGTAGTAGAGGCAAGTAG*
D3Mit278 AACTACCATCTAAAACATCCTCTGTG AGATCCCTAGAGAAACAGAACTGG
D3Mit307 GAACTTGTAGCAGAAAGAAAGATG* TGGTATTTTAAGAATCGCTCATAC*
D3Mit44 CCTGACTCATTTATTTAACTCC* CCCTATCACATAGGGCAACC
D3Mit77 TCCTGCTGACACCACCAAG AGCACCTACATTTTCCGCAA
D3Mit87 TTTGTGTGGCAATGGCTG TATCCTAAACCAGAAGGTGGTTG
D4Mit166 AGTTTCCTTTCTCTTCTACTTG* AGGGCATAGGAAACTTTCAGG
D4Mit178 GCCCTGAAGGTAAATCAGTAAC* GCTCAGGAGGTACATTGCC*
D4Mit203 GAATTCTTCCTGGGCCTTTC CAAGAGCCCAGGTGTGGTAT
D4Mit211 AAGAAAAGGACAGGTAAAG* GTTCATATTATTTAGTCTGG*
D4Mit310 TCTCCACGTGTGTGCCTTAG TGAAAGCACTCTGCAGACTCA
D5Mit10 CGAGAAGTTGGAAAGACCCA GGCACCCATGCCTCTATG
D5Mit138 AGACAGTTACCTTCTTCCCAAGG TGTTTCTCCCTTCTGCCATC
D5Mit25 AACACACCTCCATACTGGTCG GGCTAACTGAAATTGTTTTGTGC
D5Mit31 TCAGGGCTCTCTAAGGGAC* ACTATGCAGCCACCAAATCC
D5Mit346 TCAAACTCCTCTAATATGG* CTGTCTCATTAATCCATGGATC*
D5Mit388 TTTCAGAGGGTGGGAGGTA* CCTGGACTCATGGAAGCATT
D6Mit102 CCATGTGGATATCTTCCCTTG GTATACCCAGTTGTAAATCTTGT*
D6Mit105 CTGTCTCCACTACTTCTATTCC* CAAAAGCCTTATATATTACACCTC*
D6Mit139 ATAGAAGGCGAGAACTAACC* TGTTTCTGCCCCTGTAGTTG
D6Mit14 ATGCAGAAACATGAGTGG* CACAAGGCCTGATGACCTC*
D6Mit183 TTCTCAATGAACACTAGAACATTCG AAAACACAGGTAGAAAACATACA*
D6Mit188 CTTTAGTCATTATTAGGATTGC* TGGGATAGCATTGGAAACGT
D6Mit289 TGGAGATCCACGGCATTG CTAGATTGAAGAATTCCTGGACC
D6Mit52 TAAGTCAGCCCAAGGAAGTC* AAGGCACCTATATTTGTGCACA
D7Mit145 CAGGTGACCTTGGTCATGG AGAGCCCAGGGGTTTTAAG*
D7Mit227 GAGTCCTCAGCAGATATTAC* CTGATGTCTCATCATTTGGG*
D7Mit238 CATCTGCTTTTCTGCCTCT* AGGCACCTGACATTGACCTC
D7Mit31 TTCAAACCATCCAGTAAGTCC TTGGTGAACTGCTTCAATGC*
D7Mit46 GAACTTAATTGGCACAAGCC* CAATTATGTGGGTGTGCATACC
D7Mit71 CCACCTGGAATACATGTAAC* TAAGATCCAAGAGATGGGTTAAGC
D8Mit112 ATATCAGGCATGCATTATGATCC TCTCTCTAGTGGGATTATCAAC*
D8Mit121 CGGTCAATCCCGAGTTTG CAAGGCTGTCAGTCAGTGTAGG
D8Mit184 CTCAGAAGAATGCAATATACC* GAAGAATGAGGAATTTGTCC*
D8Mit242 TGTGCAACCAATTTCTTCCA CCCATGATTTATTCAGACTGAGG
D8Mit4 CCAACTCATCCCCAAAGGTA GTATGTTCAAGGCTGGGCAT
D8Mit46 GCCTGGGCTACATGAGACTC GGGAATTCCAATACACTAAAG*
D9Mit12 ATTCAAGGGGCAGTACACAT TGGTCCTGGTAAAACTGCCT
D9Mit269 GGACTAATAGTCAACTGTGTAA* AGGAAGACTGAAAACTTGTG*
D9Mit311 CAGAAAACACTAATGTTTTGTATC* AGAAAACCACCTACCTACC*
D9Mit89 CAAGGATATACATACACAGGC* TCACAGGAGGTGGCAGAAAT
D10Mit132 ACTCCAGGTTTACTGAGCAACC TGCTGATGTTTTAACAAATGGC
D10Mit134 AATCCTAGAAGATACATGCTGATGC TTAAGCACCAAAATTGAAATCA*
D10Mit183 GGTGCCATGGGTAGACATG CTTTAAGAAAGGAAGTAGTCC*
D10Mit198 CATGTTTCTCTAGCCACCTGC TCCAGCCTTTGAGGTAGCC
D10Mit266 ACCAACTACACAACATTGTC* CAGTTGCAAAGATGCCACC
D10Mit271 ACAACCAAAGGTCTTTGTAG* TATAGGCACACCTTAATAGC*
D10Mit31 CATAAGGAGCACAGGCATGA CCCTCTACGTGCATGCTGTA
D10Mit36 GGCTTTGGGGATAGCATTG AACATGCTGTCGAACAGAAGC
D10Mit38 CGATGAGCCCTAACACCAAT CCTGTTACAAACTAAACCAAAC*
D10Mit42 GCATTCAGAAGCTGGAAAGG TGCCCAGCATATGTTTAAAGG
D10Mit86 TTTGCCTGTAACAAGCCAGA TTGAGGCTATCAGTTTAAAATCC*
D11Mit2 TCCCAGAGGTCTCCAAGAC* CCACAGTGTGTGATGTCTTC
D11Mit214 CATACAGCCTTCAACAATGAC* ACTGCATACATGTGCACTCATG
D11Mit224 CATCATGGAAGGAGAGAAC* CTATAATAATTTCTCCAACCTC*
D11Mit242 GAAGCCAGCAAGAAAAATGC CTGTCTGGTAGTGCAGCCAA
D11Mit263 GAAACCATTTTAAAATATACAGTTC* CCAGGGTTAGGTAGGTATGGC
D11Mit271 TCTCCACACATTCACCATGG CTTCCTCAATTGCTCTTGCC
D11Mit36 CCAGAACTTTTGCTGCTTCC GTGAGCCCTAGGTCCAGTGA
D12Mit12 TTCAATGCCTTCTGGCTTCT GATTACCGGGTGTGTGACCT
D12Mit167 AGAAGAAATACAGTTGTTGGAGCC CTGGAGCAGACTGCAGTGAG
D12Mit201 CCACTGGATGGCAACAGAC TATGTGTTTCAAAACCACACTCG
D12Mit221 CATCAGAAATCTCTGGATTCG* GAAAAATAAGGTTACGTACG*
D12Mit259 TACCTTGAGAAAAGTATGGAGA* CAACATGTAAAAGCATGATACC*
D12Mit263 CTCAGCAGATAAATACTTGG* TCCCCTGGAGCATATTTGAC
D12Mit4 ACATCCCCAGCTCTTGTTTG AAACCAAACCAAAGAAGCTTAGG
D13Mit14 GGAACAGCAAGCTCTAAGGG CTACCAGGCCTCCCAAGATA
D13Mit202 CTCAAAAAGGTAGATAGATGGC* GCTATGTGTACATGCTTGTAGG*
D13Mit53 TTGCATGCCAACTTTCCATA AAACCCAACTAAGACATAAGGC*
D13Mit64 CCTCAGCACCAAAAAAGGAC ACATCAGTGACCAGGCATC
D13Mit67 TTTCATGGAGTCGAGTATTTTGG ATCTTGCATAGAACCTTTGGATG
D14Mit109 GAATTATCTGGAACTTACTTCC* TCTGATGGTGCTTATATGCC*
D14Mit158 GCTCTCTCTAGAAACATACACC* CAAAACACTCATGCACATAA*
D14Mit160 CAAAATTAGCAAGGATTCCAGG AGTTTAATCTCTTGGCTTTTGGG
D14Mit257 GTATAGGCATGTGCTCACG* TAAAATGATGAGTGTCTTTGCC*
D14Mit92 CTGCTGCAGAATTAATTGATT* GGATATATGGATTTATACAGA*
D14Mit97 CCAAACTCTGTTAATCTTCC* CAGCTCCACATTTTTGCTCA
D15Mit105 ACTGGCTTATCTAGCATTCTCCC CATATTGTCTTATCAGCCATGTCC
D15Mit14 GAGAGGAAAACCATGTCAATCACT TCCTCTTAAACCAAGATCTCTGC*
D15Mit171 CATCAGTCCAAGAGAGATG* TGTACAGAAGTTCAGAAACAGC*
D15Mit252 CTTCAAACATGTTATCATTGTC* CTTCTGTATTCACAGGTGCTCG
D15Mit270 ATGAGGCTCAATAAGATAAGAT* GTTGCTACTGTAAATGTCTCCTG*
D15Mit85 AGATTCGGGGATTCCTGAC* GCAAATGTGACATGAGTAAGGC
D16Mit146 CAATCTGGAGATATGTTACAAGG* ATACTTGATTAGAGTCTAGG*
D16Mit189 GAGGGCTAGAACTGCCATGC* CCAGTACAGGAAGTCTTTGCATCC*
D16Mit55 GTTTAGTAATGATTTCCTACG* GTAAGGACATATCTACCTTATC*
D16Mit76 GGAGAAAGTAAAAGATAC* GTTTTCCTGATCAAACATTTG*
D17Mit123 CACAAGGAGGGAGCCTGTAG CACCGTAAGAGTCTAATAATAAG*
D17Mit133 TCTGCTGTGTTCACAGGTGA GCCCCTGCTAGATCTGACAG
D17Mit180 GTCTAAAAACACAAGATGG* GTGTTCATATGCATGTGTGC*
D17Mit185 AAGGGACAACATACCCAGG* CCACTCTGCTTGTATTAGGG*
D17Mit50 AGTCAAACCCAGGTCCTCTG CAATTAAGCAGTAGTGGTGATGC
D17Mit72 GGCTTGGCGACATTCTAATC CAGCAAATTAACTTTCCCATC*
D18Mit40 GGTAGGAGTCACTTTCCGTCC TTTTGTGAGCATTTTTATACC*
D18Mit55 ACAGATGTTCCCCAGCATTC TGAGTGTGAGATCAGCCTG*
D18Mit60 ACCTGACACCATTTTCAGGC ATCCTTGAGCCTGTTAAAAGACA
D19Mit10 GCCTTTAAGCCAGTCAAGAC* CCAGTCTGGACTTGTGAATG*
D19Mit111 CAACTGCTCTATTTTATATTC* TACTAAATGGGCTCAGCGG*
D19Mit56 GTGTATGTGTGCAAGTATG* GAATTCAAGACTAGCCTAGG*
D19Mit6 GTAAACTGACTCCCATGCG CTCATGAGTCCCCTGGGTTA
D19Mit63 CGCTTTCTTTGACTGGAATG GTCCTTTCACTTTCCACATG*
D19Mit88 CAGTGCAACTTTGGAGGC* GGAACTGTCTTAACAGTGC*
DXMit170 GCAGGCACTAACAGTGAGG* GTTTCACTGTGCCATTGTATAC*
DXMit172 TACCACAGTTTGAATAAAGATG* GAAGAAACCATGACTCCTCTTTG
DXMit192 TAAGATACCTATTGCACATGC* CCTCCAGTCACTTCAACTTG*
DXMit54 ACATCTGATGTGGATGTTCAGC CTCCGATGGAAACTGTTGGT
DXMit74 CATTTAGAAACACTCTCTCATGC* CAAGAATCAGTGTATTTGC*
DXMit80 AGGTTGCAATCATCTGGAGG CCATTGGTCCAAGCAAGC
DXMit81 GAGGAGCATCAACCTTCTCG GAGGTGGGGAGAAACAGAGG
last updated: Wed Feb 2 11:04:07 MET 2000