2010

Phosphoproteomes of Strongylocentrotus purpuratus shell and tooth matrix: identification of a major acidic sea urchin tooth phosphoprotein, phosphodontin
Karlheinz Mann , Albert J Poustka and Matthias Mann
Proteome Science 2010, 8:6, PMID: not availible

2009

Polyploidy and genome restructuring: a variety of outcomes.
Hufton AL, Panopoulou G
Curr Opin Genet Dev 19: 600-606, 2009, PMID: 19900800

Deeply conserved chordate noncoding sequences preserve genome synteny but do not drive gene duplicate retention.
Hufton AL, Mathia S, Braun H, Georgi U, Lehrach H, Vingron M, Poustka AJ, Panopoulou G
Genome Res 19: 2036-2051, 2009, PMID: 19704032

2008top

In-depth, high-accuracy proteomics of sea urchin tooth organic matrix.
Mann K, Poustka AJ, Mann M
Proteome Sci 6: 33, 2008, PMID: 19068105

The sea urchin (Strongylocentrotus purpuratus) test and spine proteomes.
Mann K, Poustka AJ, Mann M
Proteome Sci 6: 22, 2008, PMID: 18694502

Early vertebrate whole genome duplications were predated by a period of intense genome rearrangement.
Hufton AL, Groth D, Vingron M, Lehrach H, Poustka AJ, Panopoulou G
Genome Res 18: 1582-1591, 2008, PMID: 18625908

Evolution of a core gene network for skeletogenesis in chordates.
Hecht J, Stricker S, Wiecha U, Stiege A, Panopoulou G, Podsiadlowski L, Poustka AJ, Dieterich C, Ehrich S, Suvorova J, et al.
PLoS Genet 4: e1000025, 2008, PMID: 18369444

2007top

A global view of gene expression in lithium and zinc treated sea urchin embryos: new components of gene regulatory networks.
Poustka AJ, Kuhn A, Groth D, Weise V, Yaguchi S, Burke RD, Herwig R, Lehrach H, Panopoulou G
Genome Biol 8: R85, 2007, PMID: 17506889

Modeling development: spikes of the sea urchin.
Kuhn C, Kuhn A, Poustka AJ, Klipp E
Genome Inform 18: 75-84, 2007, PMID: 18546476

2006top

The genome of the sea urchin Strongylocentrotus purpuratus.
Sodergren E, et al.
Science 314: 941-952, 2006, PMID: 17095691

Gene identification and analysis of transcripts differentially regulated in fracture healing by EST sequencing in the domestic sheep.
Hecht J, Kuhl H, Haas SA, Bauer S, Poustka AJ, Lienau J, Schell H, Stiege AC, Seitz V, et al.
BMC Genomics 7: 172, 2006, PMID: 16822315

2005top

Timing and mechanism of ancient vertebrate genome duplications -- the adventure of a hypothesis.
Panopoulou G, Poustka AJ
Trends Genet 21: 559-567, 2005, PMID: 16099069

2004top

Expression of an NK2 homeodomain gene in the apical ectoderm defines a new territory in the early sea urchin embryo.
Takacs CM, Amore G, Oliveri P, Poustka AJ, Wang D, Burke RD, Peterson KJ
Dev Biol 269: 152-164, 2004, PMID: 15081364

On the origin of the chordate central nervous system: expression of onecut in the sea urchin embryo.
Poustka AJ, Kuhn A, Radosavljevic V, Wellenreuther R, Lehrach H, Panopoulou G
Evol Dev 6: 227-236, 2004, PMID: 15230963

Nodal/activin signaling establishes oral-aboral polarity in the early sea urchin embryo.
Flowers VL, Courteau GR, Poustka AJ, Weng W, Venuti JM
Dev Dyn 231: 727-740, 2004, PMID: 15517584

2003top

A single amphioxus and sea urchin runt-gene suggests that runt-gene duplications occurred in early chordate evolution.
Stricker S, Poustka AJ, Wiecha U, Stiege A, Hecht J, Panopoulou G, Vilcinskas A, Mundlos S, Seitz V
Dev Comp Immunol 27: 673-684, 2003, PMID: 12798364

Generation, annotation, evolutionary analysis, and database integration of 20,000 unique sea urchin EST clusters.
Poustka AJ, Groth D, Hennig S, Thamm S, Cameron A, Beck A, Reinhardt R, Herwig R, Panopoulou G, Lehrach H
Genome Res 13: 2736-2746, 2003, PMID: 14656975

New evidence for genome-wide duplications at the origin of vertebrates using an amphioxus gene set and completed animal genomes.
Panopoulou G, Hennig S, Groth D, Krause A, Poustka AJ, Herwig R, Vingron M, Lehrach H
Genome Res 13: 1056-1066, 2003, PMID: 12799346

The amphioxus Hairy family: differential fate after duplication.
Minguillon C, Jimenez-Delgado S, Panopoulou G, Garcia-Fernandez J
Development 130: 5903-5914, 2003, PMID: 14561632

2002top

brachyury Target genes in the early sea urchin embryo isolated by differential macroarray screening.
Rast JP, Cameron RA, Poustka AJ, Davidson EH.
Dev Biol 246: 191-208, 2002, PMID: 12027442

2001top

Developmentally controlled expression patterns of intermediate filament proteins in the cephalochordate Branchiostoma.
Karabinos A, Wang J, Wenzel D, Panopoulou G, Lehrach H, Weber K
Mech Dev 101: 283-288, 2001, PMID: 11231092

The Mnx homeobox gene class defined by HB9, MNR2 and amphioxus AmphiMnx.
Ferrier DE, Brooke NM, Panopoulou G, Holland PW
Dev Genes Evol 211: 103-107, 2001, PMID: 11455421

2000top

Characterization of amphioxus AmphiWnt8: insights into the evolution of patterning of the embryonic dorsoventral axis.
Schubert M, Holland LZ, Panopoulou GD, Lehrach H, Holland ND
Evol Dev 2: 85-92, 2000, PMID: 11258394

Amphioxus goosecoid and the evolution of the head organizer and prechordal plate.
Neidert AH, Panopoulou G, Langeland JA
Evol Dev 2: 303-310, 2000, PMID: 11256375

An amphioxus Krox gene: insights into vertebrate hindbrain evolution.
Knight RD, Panopoulou GD, Holland PW, Shimeld SM
Dev Genes Evol 210: 518-521, 2000, PMID: 11180801

Characterisation and tissue-specific expression of the two keratin subfamilies of intermediate filament proteins in the cephalochordate Branchiostoma.
Karabinos A, Riemer D, Panopoulou G, Lehrach H, Weber K
Eur J Cell Biol 79: 17-26, 2000, PMID: 10711422

A sea urchin genome project: sequence scan, virtual map, and additional resources.
Cameron RA, Mahairas G, Rast JP, Martinez P, Biondi TR, Swartzell S, Wallace JC, Poustka AJ, Livingston BT, Wray GA, et al.
Proc Natl Acad Sci U S A 97: 9514-9518, 2000, PMID: 10920195

1999 top

Toward the gene catalogue of sea urchin development: the construction and analysis of an unfertilized egg cDNA library highly normalized by oligonucleotide fingerprinting.
Poustka AJ, Herwig R, Krause A, Hennig S, Meier-Ewert S, Lehrach H
Genomics 59: 122-133, 1999, PMID: 10409423

Large-scale clustering of cDNA-fingerprinting data.
Herwig R, Poustka AJ, Muller C, Bull C, Lehrach H, O'Brien J
Genome Res 9: 1093-1105, 1999, PMID: 10568749

Characterization of the Hydra lamin and its gene: A molecular phylogeny of metazoan lamins.
Erber A, Riemer D, Hofemeister H, Bovenschulte M, Stick R, Panopoulou G, Lehrach H, Weber K
J Mol Evol 49: 260-271, 1999, PMID: 10441677

Sequence analysis of an amphioxus cosmid containing a gene homologous to members of the aldo-keto reductase gene superfamily.
Boeddrich A, Burgtorf C, Francis F, Hennig S, Panopoulou G, Steffens C, Borzym K, Lehrach H
Gene 230: 207-214, PMID: 10216259

AmphiBMP2/4, an amphioxus bone morphogenetic protein closely related to Drosophila decapentaplegic and vertebrate BMP2 and BMP4: insights into evolution of dorsoventral axis specification.
Panopoulou GD, Clark MD, Holland LZ, Lehrach H, Holland ND
Dev Dyn 213: 130-139, PMID: 9733108

Sequence and developmental expression of AmphiTob, an amphioxus homolog of vertebrate Tob in the PC3/BTG1/Tob family of tumor suppressor genes.
Holland ND, Zhang SC, Clark M, Panopoulou G, Lehrach H, Holland LZ
Dev Dyn 210: 11-18, 1997, PMID: 9286591